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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800781.1_cds_XP_016471729.1_6373
CDS Infomation

[gene=LOC107793803] [db_xref=GeneID:107793803] [protein=uncharacterized protein At5g03900, chloroplastic-like] [protein_id=XP_016471729.1] [location=complement(join(4349..4492,5400..5543,6661..6724,6810..6896,6985..7127,11218..11283,15247..15333,16999..17064,17149..17221,19741..19821,19953..20053,20150..20257,25401..25778))] [gbkey=CDS]
Sequence

ATGGCAGCCATTTCCACATGCTTCTTCACAGTGAGACCCACCAAGACTCAATCCATTGCA
TTCCCTCGAAAACCCTCTTGCTTTATCCTAAAACCTTCAAGAATACACTCTGGGTCTTTC
AGCAAAAACCTGATTTTAAGGCATAATATAAGGAGGAGTTCATCAGTTCATTGTAGTGTT
GATGTTGAGGTTAAGGCTGGAGGGATTGTGGAGAGCGATAAGCTGCCGTCAGATGTACGG
AAGAGGGCAATGGACGCAGTGGATGCATTGGGAAAGAGGGTTACAGTTGGGGATGTTGCT
AGTAAAGCTGGCCTTCAGTTGTCTCAAGCTCAGAAAGCTCTCCAAGCTCTCGCTACTGAT
ACTAATGGCTTCTTGGAGGTGTCAGATGAAGGTGATGTCCTTTATGTATTTCCTAAGGAT
TATCGTTCAAATCTCACCGCTAAATCATTTAGGATGAAGGTTGAGCCTTTCCTGGAGAAA
GCAAAGCTTGCAGGTGAATACTTAGTGAGGGTTTCCTTTGGTACAGCATTAATTGCTTCA
ATTGTCATTGTCTATACAACCATAATTGCTATCCTCTCTAGTAGAAGTGAAGAAGACAAT
CGGGGAAGACGAGGCAGATCTTATGACAGTGGTTTCACATTTTACTTAAGTCCAACTGAT
TTATTCTGGTATTGGGATCCATACTATTATAGGAGACAACGAGTTCGCAAAGAAAGTGGT
GGGATGAACTTCATTGAATCTGTTTTCTCCTTTGTATTTGGTGATGGTGATCCAAATCAA
GAGATTGAAGAGGAGAGGTGGAAGTTGGTAGGGCAATATATATCATCAAATGGTGGCGTT
GTTGCTGCTGAAGAACTTGCTCCCTTTCTTGATGTGGAGACTCCTAACAAAACGGATGAT
GAGTCCTACATCCTTCCAGTGCTTTTGCGGTTTGATGGTCAGCCAGAAGTAGATGAGGAG
GGAAATATCCTGTACCAATTTCCATCACTTCAGCGTACGGCTGCTCCACAAAGGAGTGGA
AGGAAGGAGTACGTAGGAAAAAGATGGACTGACTGGGTTGGACAGGTGGAAAGATTTCTG
CAAGAAAAGAAGTGGCAATTTAGTAAAACAAGCTCATCGGAAAAGGCATTGGTCATTGGA
TTGGGTGGGCTCAATCTGTTTGGAGTGATTATTCTTGGTACCATGTTGAAGAACATGACA
GTCAGTCCAAGTAGCTTCATCTCATTTGTGTCAGAGATATTTCCATTACTTCAGATTTAT
GCTGGCTCATTTTTCACTATTCCCCTGATCCGATGGTTTCTTGTTCGAAAGAGAAATGCT
GATATTGAAAGAAGAAATCAAGCAAGGGAACAATATGCCCGAGCACTTGAACGGCCTGAT
CTGGCACTACGGCGAAAGCTTCTCAGTGCCCGGGATATGGCACAGAGGACTTTTATTGGC
CAAGATCGAATTGTTTACAGTACAGACAAGGACTTATACGAGCAAGATTATGATGCACAA
CAATGGGAGCAGAGATTCCGAGAAATTGAGAAGTCCGAATAG

Peptide Sequence

PEP ID

XP_016471729.1
PEP Infomation

PREDICTED: uncharacterized protein At5g03900, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAISTCFFTVRPTKTQSIAFPRKPSCFILKPSRIHSGSFSKNLILRHNIRRSSSVHCSV
DVEVKAGGIVESDKLPSDVRKRAMDAVDALGKRVTVGDVASKAGLQLSQAQKALQALATD
TNGFLEVSDEGDVLYVFPKDYRSNLTAKSFRMKVEPFLEKAKLAGEYLVRVSFGTALIAS
IVIVYTTIIAILSSRSEEDNRGRRGRSYDSGFTFYLSPTDLFWYWDPYYYRRQRVRKESG
GMNFIESVFSFVFGDGDPNQEIEEERWKLVGQYISSNGGVVAAEELAPFLDVETPNKTDD
ESYILPVLLRFDGQPEVDEEGNILYQFPSLQRTAAPQRSGRKEYVGKRWTDWVGQVERFL
QEKKWQFSKTSSSEKALVIGLGGLNLFGVIILGTMLKNMTVSPSSFISFVSEIFPLLQIY
AGSFFTIPLIRWFLVRKRNADIERRNQAREQYARALERPDLALRRKLLSARDMAQRTFIG
QDRIVYSTDKDLYEQDYDAQQWEQRFREIEKSE

Transcript Sequence

Gene sequence data has not been registered.